Pseudomonas prosekii strain A2-NA12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas prosekii strain A2-NA12 is characterized by having a single replicon, which is a notable trait for its genomic organization. This strain is cataloged under the accession number PEGA00000000.1, indicating its place in genetic databases and providing a reference for further study. As a member of the Pseudomonas genus, P. prosekii typically exhibits traits such as metabolic versatility and adaptability to various environments. While specific metabolic pathways and ecological roles of strain A2-NA12 are not detailed in the provided information, Pseudomonas species are often recognized for their ability to degrade organic compounds and thrive in diverse ecological niches. The presence of a single replicon in Pseudomonas prosekii strain A2-NA12 may suggest a streamlined genomic structure that could impact its adaptability and evolutionary strategies. With fewer replicons, this strain might exhibit certain efficiencies in replication and gene regulation, potentially allowing it to respond more rapidly to environmental changes. Biologically, the ecological insight that can be drawn from the traits of Pseudomonas prosekii strain A2-NA12 is its potential role in bioremediation or nutrient cycling within its habitat. Its genomic characteristics may enhance its effectiveness in breaking down pollutants or contributing to soil health, highlighting the importance of understanding microbial genomes in ecological and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas prosekii
Strainstrain A2-NA12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas prosekii strain A2-NA12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas prosekii strain A2-NA12

Gene Summary

Adenine Count

1193948 bp

Thymine Count

1178202 bp

Guanine Count

1742633 bp

Cytosine Count

1767600 bp

Genome Length

5933352 bp

Protein-coding Genes

5177 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneCS076_26150Not AvailablePositive5738896 - 57390967100.6
cytochrome-c oxidase, cbb3-type subunit iiiCS076_26155Not AvailablePositive5739093 - 574004634067.6
cytochrome-c oxidase, cbb3-type subunit iCS076_26160Not AvailablePositive5740528 - 574197053416.7
cytochrome-c oxidase, cbb3-type subunit iiCS076_26165Not AvailablePositive5741970 - 574257822530.2
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneCS076_26170Not AvailablePositive5742584 - 57427696763.24
cytochrome-c oxidase, cbb3-type subunit iiiCS076_26175Not AvailablePositive5742766 - 574374935553.2
prevent-host-death proteinCS076_26180Not AvailablePositive5744046 - 57443039365.25
vapc toxin family pin domain ribonucleaseCS076_26185Not AvailablePositive5744303 - 574471314975.3
cytochrome c oxidase accessory protein ccogCS076_26190Not AvailablePositive5744919 - 574633453517.9
hypothetical proteinCS076_26195Not AvailablePositive5746346 - 574688520157.1

Displaying genes 5091 – 5100 of 5270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.