Pseudomonas prosekii strain A2-NA12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas prosekii strain A2-NA12 is characterized by having a single replicon, which is a notable trait for its genomic organization. This strain is cataloged under the accession number PEGA00000000.1, indicating its place in genetic databases and providing a reference for further study. As a member of the Pseudomonas genus, P. prosekii typically exhibits traits such as metabolic versatility and adaptability to various environments. While specific metabolic pathways and ecological roles of strain A2-NA12 are not detailed in the provided information, Pseudomonas species are often recognized for their ability to degrade organic compounds and thrive in diverse ecological niches. The presence of a single replicon in Pseudomonas prosekii strain A2-NA12 may suggest a streamlined genomic structure that could impact its adaptability and evolutionary strategies. With fewer replicons, this strain might exhibit certain efficiencies in replication and gene regulation, potentially allowing it to respond more rapidly to environmental changes. Biologically, the ecological insight that can be drawn from the traits of Pseudomonas prosekii strain A2-NA12 is its potential role in bioremediation or nutrient cycling within its habitat. Its genomic characteristics may enhance its effectiveness in breaking down pollutants or contributing to soil health, highlighting the importance of understanding microbial genomes in ecological and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas prosekii
Strainstrain A2-NA12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas prosekii strain A2-NA12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas prosekii strain A2-NA12

Gene Summary

Adenine Count

1193948 bp

Thymine Count

1178202 bp

Guanine Count

1742633 bp

Cytosine Count

1767600 bp

Genome Length

5933352 bp

Protein-coding Genes

5177 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
caspaseCS076_15705Not AvailableNegative3438780 - 343973934834.4
molecular chaperone tirCS076_15710Not AvailableNegative3439742 - 344014914997.1
small ribosomal subunit biogenesis gtpase rsgaCS076_15715Not AvailableNegative3440360 - 344139137410.9
oligoribonucleaseCS076_15720Not AvailablePositive3441499 - 344204120527.4
hypothetical proteinCS076_15725Not AvailablePositive3442325 - 344293622439.3
trna epoxyqueuosine(34) reductase quegCS076_15730Not AvailableNegative3443050 - 344411439893.9
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseCS076_15735Not AvailablePositive3444178 - 344567751361.1
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeCS076_15740Not AvailablePositive3445665 - 344613517083.3
n-acetylmuramoyl-l-alanine amidaseCS076_15745Not AvailablePositive3446136 - 344756350418.6
dna mismatch repair endonuclease mutlCS076_15750Not AvailablePositive3447560 - 344947069936.5

Displaying genes 3061 – 3070 of 5270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.