Pseudomonas prosekii strain A2-NA12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas prosekii strain A2-NA12 is characterized by having a single replicon, which is a notable trait for its genomic organization. This strain is cataloged under the accession number PEGA00000000.1, indicating its place in genetic databases and providing a reference for further study. As a member of the Pseudomonas genus, P. prosekii typically exhibits traits such as metabolic versatility and adaptability to various environments. While specific metabolic pathways and ecological roles of strain A2-NA12 are not detailed in the provided information, Pseudomonas species are often recognized for their ability to degrade organic compounds and thrive in diverse ecological niches. The presence of a single replicon in Pseudomonas prosekii strain A2-NA12 may suggest a streamlined genomic structure that could impact its adaptability and evolutionary strategies. With fewer replicons, this strain might exhibit certain efficiencies in replication and gene regulation, potentially allowing it to respond more rapidly to environmental changes. Biologically, the ecological insight that can be drawn from the traits of Pseudomonas prosekii strain A2-NA12 is its potential role in bioremediation or nutrient cycling within its habitat. Its genomic characteristics may enhance its effectiveness in breaking down pollutants or contributing to soil health, highlighting the importance of understanding microbial genomes in ecological and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas prosekii
Strainstrain A2-NA12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas prosekii strain A2-NA12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas prosekii strain A2-NA12

Gene Summary

Adenine Count

1193948 bp

Thymine Count

1178202 bp

Guanine Count

1742633 bp

Cytosine Count

1767600 bp

Genome Length

5933352 bp

Protein-coding Genes

5177 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deoxyguanosinetriphosphate triphosphohydrolaseCS076_05620Not AvailablePositive1231290 - 123262149781.4
dna-binding response regulatorCS076_05625Not AvailablePositive1233165 - 123379123273.9
hypothetical proteinCS076_05635Not AvailablePositive1237453 - 1240389109235.0
gaf domain-containing proteinCS076_05640Not AvailableNegative1240925 - 124140717264.6
duf815 domain-containing proteinCS076_05645Not AvailableNegative1241404 - 124229433792.2
hybrid sensor histidine kinase/response regulatorCS076_05650Not AvailablePositive1242461 - 124478284938.5
marr family transcriptional regulatorCS076_05655Not AvailableNegative1244766 - 124522717177.1
glutathione peroxidaseCS076_05660Not AvailableNegative1245224 - 124570917688.4
peptide-methionine (r)-s-oxide reductaseCS076_05665Not AvailableNegative1245908 - 124630314664.5
pyridoxal phosphate-dependent aminotransferaseCS076_05670Not AvailablePositive1246530 - 124774144734.0

Displaying genes 1101 – 1110 of 5270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.