Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atpase | CSX02_04805 | Not Available | Negative | 1003419 - 1004045 | 23697.9 |
| hypothetical protein | CSX02_04810 | Not Available | Negative | 1004039 - 1005397 | 53158.3 |
| hypothetical protein | CSX02_04815 | Not Available | Negative | 1005375 - 1006121 | 27827.4 |
| hypothetical protein | CSX02_04820 | Not Available | Negative | 1006111 - 1006971 | 34477.6 |
| atp synthase f1 subunit epsilon | CSX02_04825 | Not Available | Negative | 1007187 - 1007594 | 15035.8 |
| f0f1 atp synthase subunit beta | CSX02_04830 | Not Available | Negative | 1007606 - 1008997 | 50425.5 |
| atp synthase f1 subunit gamma | CSX02_04835 | Not Available | Negative | 1009041 - 1009901 | 31574.4 |
| f0f1 atp synthase subunit alpha | CSX02_04840 | Not Available | Negative | 1009923 - 1011428 | 54480.7 |
| atp synthase f1 subunit delta | CSX02_04845 | Not Available | Negative | 1011425 - 1011991 | 21202.7 |
| atp synthase f0 subunit b | CSX02_04850 | Not Available | Negative | 1011979 - 1012506 | 19609.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

