Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | CSX02_04705 | Not Available | Negative | 973220 - 974269 | 40513.7 |
| hypothetical protein | CSX02_04710 | Not Available | Positive | 974449 - 976188 | 65905.5 |
| transcriptional regulator | CSX02_04715 | Not Available | Positive | 976833 - 976920 | 3416.1 |
| sodium-translocating pyrophosphatase | CSX02_04720 | Not Available | Negative | 976929 - 979028 | 72807.0 |
| abc transporter atp-binding protein | CSX02_04725 | Not Available | Negative | 979211 - 980935 | 65407.9 |
| multidrug abc transporter atp-binding protein | CSX02_04730 | Not Available | Negative | 980941 - 982731 | 66920.1 |
| hypothetical protein | CSX02_04735 | Not Available | Negative | 982736 - 984361 | 62567.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | CSX02_04740 | Not Available | Negative | 984364 - 985239 | 32311.3 |
| hydrolase tatd | CSX02_04745 | Not Available | Negative | 985322 - 986107 | 29407.0 |
| alpha/beta hydrolase | CSX02_04750 | Not Available | Negative | 986104 - 986883 | 28504.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

