Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | CSX02_04555 | Not Available | Positive | 949593 - 950261 | 25273.5 |
| dna-directed rna polymerase subunit omega | CSX02_04560 | Not Available | Positive | 950258 - 950500 | 8840.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | CSX02_04565 | Not Available | Positive | 950555 - 951877 | 49952.9 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | CSX02_04570 | Not Available | Positive | 951874 - 952416 | 20581.9 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | CSX02_04575 | Not Available | Positive | 952418 - 952975 | 21359.8 |
| pantetheine-phosphate adenylyltransferase | CSX02_04580 | Not Available | Positive | 952978 - 953466 | 18234.0 |
| atpase | CSX02_04585 | Not Available | Positive | 953468 - 954142 | 25193.0 |
| aminoacyl-histidine dipeptidase | CSX02_04590 | Not Available | Positive | 954207 - 955664 | 54179.6 |
| 16s rrna pseudouridine(516) synthase | CSX02_04595 | Not Available | Positive | 955651 - 956364 | 26894.4 |
| rna pseudouridine synthase | CSX02_04600 | Not Available | Positive | 956351 - 957319 | 36813.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

