Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s10 | CSX02_04505 | Not Available | Negative | 942570 - 942887 | 11977.7 |
| multidrug abc transporter atp-binding protein | CSX02_04510 | Not Available | Negative | 943203 - 943829 | 22939.1 |
| hypothetical protein | CSX02_04515 | Not Available | Negative | 943844 - 944641 | 29530.6 |
| hypothetical protein | CSX02_04520 | Not Available | Negative | 944638 - 945204 | 21272.2 |
| hypothetical protein | CSX02_04525 | Not Available | Negative | 945191 - 945949 | 28031.2 |
| hypothetical protein | CSX02_04530 | Not Available | Negative | 946032 - 946379 | 13068.0 |
| hypothetical protein | CSX02_04535 | Not Available | Negative | 946483 - 947148 | 25173.8 |
| hypothetical protein | CSX02_04540 | Not Available | Negative | 947195 - 947551 | 13420.6 |
| hypothetical protein | CSX02_04545 | Not Available | Negative | 947530 - 948213 | 25970.2 |
| yicc family protein | CSX02_04550 | Not Available | Positive | 948689 - 949567 | 33777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

