Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s17 | CSX02_04455 | Not Available | Negative | 937664 - 937921 | 10033.4 |
| 50s ribosomal protein l29 | CSX02_04460 | Not Available | Negative | 937954 - 938163 | 7849.4 |
| 50s ribosomal protein l16 | CSX02_04465 | Not Available | Negative | 938153 - 938590 | 16162.8 |
| 30s ribosomal protein s3 | CSX02_04470 | Not Available | Negative | 938593 - 939249 | 24031.1 |
| 50s ribosomal protein l22 | CSX02_04475 | Not Available | Negative | 939260 - 939646 | 14334.3 |
| 30s ribosomal protein s19 | CSX02_04480 | Not Available | Negative | 939667 - 939948 | 10360.5 |
| 50s ribosomal protein l2 | CSX02_04485 | Not Available | Negative | 939965 - 940810 | 30497.3 |
| 50s ribosomal protein l23 | CSX02_04490 | Not Available | Negative | 940876 - 941175 | 11058.6 |
| 50s ribosomal protein l4 | CSX02_04495 | Not Available | Negative | 941175 - 941795 | 22678.3 |
| 50s ribosomal protein l3 | CSX02_04500 | Not Available | Negative | 941824 - 942507 | 24125.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

