Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | CSX02_04405 | Not Available | Negative | 933649 - 934089 | 15540.6 |
| 50s ribosomal protein l30 | CSX02_04410 | Not Available | Negative | 934100 - 934282 | 6418.01 |
| 30s ribosomal protein s5 | CSX02_04415 | Not Available | Negative | 934296 - 934805 | 17799.8 |
| 50s ribosomal protein l18 | CSX02_04420 | Not Available | Negative | 934818 - 935186 | 13286.0 |
| 50s ribosomal protein l6 | CSX02_04425 | Not Available | Negative | 935209 - 935748 | 19679.1 |
| 30s ribosomal protein s8 | CSX02_04430 | Not Available | Negative | 935764 - 936165 | 14543.8 |
| type z 30s ribosomal protein s14 | CSX02_04435 | Not Available | Negative | 936189 - 936374 | 7137.97 |
| 50s ribosomal protein l5 | CSX02_04440 | Not Available | Negative | 936393 - 936932 | 20275.9 |
| 50s ribosomal protein l24 | CSX02_04445 | Not Available | Negative | 936956 - 937267 | 11158.8 |
| 50s ribosomal protein l14 | CSX02_04450 | Not Available | Negative | 937278 - 937646 | 13322.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

