Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | CSX02_04355 | Not Available | Negative | 926912 - 927406 | 18586.8 |
| dna-directed rna polymerase subunit alpha | CSX02_04360 | Not Available | Negative | 927567 - 928529 | 35109.9 |
| 30s ribosomal protein s4 | CSX02_04365 | Not Available | Negative | 928626 - 929219 | 22787.9 |
| 30s ribosomal protein s11 | CSX02_04370 | Not Available | Negative | 929239 - 929634 | 13803.8 |
| 30s ribosomal protein s13 | CSX02_04375 | Not Available | Negative | 929656 - 930024 | 13847.9 |
| 50s ribosomal protein l36 | CSX02_04380 | Not Available | Negative | 930326 - 930439 | 4307.53 |
| translation initiation factor if-1 | CSX02_04385 | Not Available | Negative | 930578 - 930796 | 8234.2 |
| type i methionyl aminopeptidase | CSX02_04390 | Not Available | Negative | 930808 - 931602 | 29421.2 |
| adenylate kinase | CSX02_04395 | Not Available | Negative | 931606 - 932250 | 23492.2 |
| preprotein translocase subunit secy | CSX02_04400 | Not Available | Negative | 932333 - 933649 | 47893.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

