Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_00210 | Not Available | Negative | 37758 - 37955 | 7127.59 |
| hypothetical protein | CSX02_00215 | Not Available | Negative | 38038 - 39117 | 39800.9 |
| hypothetical protein | CSX02_00220 | Not Available | Negative | 39404 - 39688 | 10440.7 |
| transcriptional regulator | CSX02_00225 | Not Available | Negative | 39675 - 39875 | 8002.72 |
| hypothetical protein | CSX02_00230 | Not Available | Negative | 40108 - 40998 | 32928.7 |
| hypothetical protein | CSX02_00235 | Not Available | Negative | 41091 - 41840 | 28094.0 |
| hypothetical protein | CSX02_00240 | Not Available | Negative | 41890 - 42438 | 19153.3 |
| hypothetical protein | CSX02_00245 | Not Available | Negative | 42457 - 43275 | 30723.8 |
| hypothetical protein | CSX02_00250 | Not Available | Negative | 43429 - 44805 | 51842.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 45370 - 45601 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

