Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucokinase | CSX02_04305 | Not Available | Negative | 914331 - 915269 | 32260.7 |
| glycosyl transferase | CSX02_04310 | Not Available | Negative | 915376 - 917511 | 81742.7 |
| shikimate kinase | CSX02_04315 | Not Available | Negative | 917516 - 918022 | 19050.2 |
| shikimate dehydrogenase | CSX02_04320 | Not Available | Negative | 918019 - 918900 | 32132.9 |
| phosphatase | CSX02_04325 | Not Available | Negative | 918918 - 921143 | 83336.9 |
| sulfatase | CSX02_04330 | Not Available | Negative | 921145 - 923094 | 74465.1 |
| hypothetical protein | CSX02_04335 | Not Available | Positive | 923199 - 924161 | 37232.7 |
| hydroxyacid dehydrogenase | CSX02_04340 | Not Available | Negative | 924148 - 925083 | 35026.6 |
| galactose-1-epimerase | CSX02_04345 | Not Available | Negative | 925087 - 926112 | 37614.4 |
| hypothetical protein | CSX02_04350 | Not Available | Positive | 926293 - 926850 | 20704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

