Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_04155 | Not Available | Positive | 883437 - 884120 | 25509.4 |
| hypothetical protein | CSX02_04160 | Not Available | Positive | 884123 - 884557 | 16635.1 |
| acyl carrier protein | CSX02_04165 | Not Available | Positive | 884576 - 884818 | 9252.58 |
| amp-dependent synthetase | CSX02_04170 | Not Available | Positive | 884843 - 886243 | 53148.5 |
| hypothetical protein | CSX02_04175 | Not Available | Positive | 886240 - 886914 | 25819.1 |
| glycosyltransferase | CSX02_04180 | Not Available | Positive | 886911 - 887834 | 34891.8 |
| hypothetical protein | CSX02_04185 | Not Available | Positive | 887841 - 888551 | 27646.9 |
| hypothetical protein | CSX02_04190 | Not Available | Positive | 888780 - 889283 | 18739.3 |
| alginate o-acetyltransferase | CSX02_04195 | Not Available | Positive | 889437 - 890867 | 55157.3 |
| hypothetical protein | CSX02_04200 | Not Available | Positive | 890880 - 892079 | 46033.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

