Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CSX02_03850 | Not Available | Negative | 814111 - 815838 | 62527.5 |
| maltose abc transporter substrate-binding protein | CSX02_03855 | Not Available | Negative | 815850 - 817166 | 46719.2 |
| hypothetical protein | CSX02_03860 | Not Available | Negative | 817439 - 817942 | 18937.1 |
| m18 family aminopeptidase | CSX02_03865 | Not Available | Negative | 817939 - 819249 | 47783.3 |
| hypothetical protein | CSX02_03870 | Not Available | Positive | 819412 - 819654 | 9351.13 |
| hypothetical protein | CSX02_03875 | Not Available | Positive | 819641 - 819895 | 9584.29 |
| 5'/3'-nucleotidase sure | CSX02_03880 | Not Available | Positive | 819897 - 820691 | 28916.1 |
| peptide-methionine (s)-s-oxide reductase | CSX02_03885 | Not Available | Positive | 820747 - 821256 | 19437.4 |
| glycerol kinase | CSX02_03890 | Not Available | Positive | 821459 - 822967 | 55084.6 |
| amidophosphoribosyltransferase | CSX02_03895 | Not Available | Positive | 822960 - 823691 | 27775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

