Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_00160 | Not Available | Negative | 28001 - 28306 | 11057.5 |
| hydrolase nlp/p60 | CSX02_00165 | Not Available | Negative | 28316 - 30007 | 63359.9 |
| conjugal transfer protein trae | CSX02_00170 | Not Available | Negative | 30026 - 32419 | 90689.6 |
| prgi family protein | CSX02_00175 | Not Available | Negative | 32445 - 32870 | 16076.9 |
| hypothetical protein | CSX02_00180 | Not Available | Negative | 32893 - 33759 | 31731.3 |
| conjugal transfer protein | CSX02_00185 | Not Available | Negative | 33830 - 34042 | 6992.78 |
| conjugal transfer protein trag | CSX02_00190 | Not Available | Negative | 34165 - 35928 | 66134.5 |
| hypothetical protein | CSX02_00195 | Not Available | Negative | 35925 - 36428 | 19236.6 |
| hypothetical protein | CSX02_00200 | Not Available | Negative | 36459 - 36869 | 14878.0 |
| replication initiator a domain-containing protein | CSX02_00205 | Not Available | Negative | 36884 - 37753 | 33841.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

