Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | CSX02_03800 | Not Available | Negative | 802665 - 802901 | 9110.84 |
| amino acid adenylation protein | CSX02_03805 | Not Available | Negative | 802903 - 804447 | 57437.0 |
| hypothetical protein | CSX02_03810 | Not Available | Negative | 804449 - 805540 | 42619.7 |
| hypothetical protein | CSX02_03815 | Not Available | Negative | 805633 - 806709 | 41847.9 |
| Trna-leu | Not Available | Not Available | Positive | 806838 - 806921 | Not Available |
| diguanylate cyclase | CSX02_03825 | Not Available | Negative | 806964 - 809618 | 101761.0 |
| n-acetylmuramoyl-l-alanine amidase | CSX02_03830 | Not Available | Negative | 809811 - 810521 | 26733.6 |
| branched-chain amino acid aminotransferase | CSX02_03835 | Not Available | Negative | 810514 - 811539 | 37832.3 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | CSX02_03840 | Not Available | Negative | 811677 - 812909 | 46221.9 |
| degv family protein | CSX02_03845 | Not Available | Negative | 813037 - 813876 | 31149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

