Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_03700 | Not Available | Positive | 780367 - 781620 | 48472.8 |
| hypothetical protein | CSX02_03705 | Not Available | Positive | 781728 - 782105 | 13819.9 |
| hypothetical protein | CSX02_03710 | Not Available | Positive | 782108 - 783337 | 46840.7 |
| hypothetical protein | CSX02_03715 | Not Available | Positive | 783321 - 784004 | 26174.8 |
| hypothetical protein | CSX02_03720 | Not Available | Positive | 783998 - 784813 | 31528.8 |
| multidrug abc transporter atp-binding protein | CSX02_03725 | Not Available | Positive | 784815 - 785432 | 23009.2 |
| carboxyl transferase | CSX02_03730 | Not Available | Positive | 785654 - 787090 | 51580.1 |
| sodium pump decarboxylase subunit gamma | CSX02_03735 | Not Available | Positive | 787109 - 787915 | 29607.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | CSX02_03740 | Not Available | Positive | 787932 - 788294 | 11926.3 |
| sodium ion-translocating decarboxylase subunit beta | CSX02_03745 | Not Available | Positive | 788317 - 789465 | 40264.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

