Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_03500 | Not Available | Positive | 740711 - 741379 | 25130.8 |
| hypothetical protein | CSX02_03505 | Not Available | Positive | 741369 - 741890 | 19292.3 |
| 30s ribosomal protein s2 | CSX02_03510 | Not Available | Positive | 742060 - 742800 | 27390.9 |
| elongation factor ts | CSX02_03515 | Not Available | Positive | 742830 - 743765 | 33495.9 |
| peptidoglycan-n-acetylglucosamine deacetylase | CSX02_03520 | Not Available | Positive | 743922 - 744842 | 34803.9 |
| cell shape determination protein ccma | CSX02_03525 | Not Available | Positive | 744864 - 745568 | 23788.8 |
| ump kinase | CSX02_03530 | Not Available | Positive | 745594 - 746289 | 25239.6 |
| ribosome-recycling factor | CSX02_03535 | Not Available | Positive | 746305 - 746859 | 20901.1 |
| di-trans,poly-cis-decaprenylcistransferase | CSX02_03540 | Not Available | Positive | 746920 - 747633 | 27155.7 |
| phosphatidate cytidylyltransferase | CSX02_03545 | Not Available | Positive | 747655 - 748476 | 29912.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

