Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_00110 | Not Available | Negative | 19581 - 21386 | 67541.0 |
| hypothetical protein | CSX02_00115 | Not Available | Negative | 21383 - 21835 | 17403.8 |
| hypothetical protein | CSX02_00120 | Not Available | Negative | 21825 - 22838 | 38448.9 |
| hypothetical protein | CSX02_00125 | Not Available | Negative | 22858 - 23058 | 8055.77 |
| transcriptional regulator | CSX02_00130 | Not Available | Negative | 22998 - 23222 | 8384.23 |
| relaxase | CSX02_00135 | Not Available | Negative | 23671 - 25068 | 54159.6 |
| plasmid mobilization relaxosome protein mobc | CSX02_00140 | Not Available | Negative | 25087 - 25416 | 12855.7 |
| hypothetical protein | CSX02_00145 | Not Available | Negative | 25418 - 25774 | 12958.3 |
| hypothetical protein | CSX02_00150 | Not Available | Negative | 25776 - 26996 | 45460.8 |
| hypothetical protein | CSX02_00155 | Not Available | Negative | 27169 - 28080 | 33541.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

