Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | CSX02_03250 | Not Available | Negative | 683206 - 685578 | 90212.9 |
| hybrid sensor histidine kinase/response regulator | CSX02_03255 | Not Available | Negative | 685583 - 689791 | 156851.0 |
| diguanylate cyclase | CSX02_03260 | Not Available | Negative | 689809 - 691929 | 79242.2 |
| gntr family transcriptional regulator | CSX02_03265 | Not Available | Negative | 691998 - 693077 | 41020.2 |
| hypothetical protein | CSX02_03270 | Not Available | Negative | 693090 - 694229 | 43418.5 |
| abc transporter atp-binding protein | CSX02_03275 | Not Available | Negative | 694360 - 696105 | 64043.2 |
| abc transporter atp-binding protein | CSX02_03280 | Not Available | Negative | 696106 - 697908 | 65300.5 |
| dna alkylation repair protein | CSX02_03285 | Not Available | Negative | 698077 - 698748 | 26743.3 |
| hypothetical protein | CSX02_03290 | Not Available | Negative | 698732 - 700282 | 59734.1 |
| lysr family transcriptional regulator | CSX02_03295 | Not Available | Negative | 700342 - 701259 | 34704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

