Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase | CSX02_03200 | Not Available | Positive | 672103 - 672723 | 23014.1 |
| hypothetical protein | CSX02_03205 | Not Available | Positive | 672993 - 673763 | 29645.8 |
| hypothetical protein | CSX02_03210 | Not Available | Positive | 673753 - 674472 | 27798.2 |
| hypothetical protein | CSX02_03215 | Not Available | Positive | 674459 - 675151 | 27204.6 |
| multidrug abc transporter atp-binding protein | CSX02_03220 | Not Available | Positive | 675162 - 675791 | 23177.3 |
| hypothetical protein | CSX02_03225 | Not Available | Positive | 675879 - 677225 | 51269.5 |
| hypothetical protein | CSX02_03230 | Not Available | Positive | 677250 - 678335 | 41877.7 |
| hypothetical protein | CSX02_03235 | Not Available | Positive | 678352 - 680985 | 97271.2 |
| oxidoreductase | CSX02_03240 | Not Available | Positive | 681364 - 682473 | 42216.0 |
| hypothetical protein | CSX02_03245 | Not Available | Negative | 682690 - 683202 | 19624.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

