Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase | CSX02_03145 | Not Available | Positive | 660508 - 661668 | 42009.0 |
| sulfonate abc transporter atp-binding protein | CSX02_03150 | Not Available | Positive | 661819 - 662607 | 29401.5 |
| abc transporter permease | CSX02_03155 | Not Available | Positive | 662604 - 663416 | 29660.6 |
| abc transporter permease | CSX02_03160 | Not Available | Positive | 663419 - 664273 | 31702.6 |
| nitrate abc transporter substrate-binding protein | CSX02_03165 | Not Available | Positive | 664299 - 665417 | 40240.7 |
| dihydropyrimidinase | CSX02_03170 | Not Available | Positive | 665448 - 666815 | 50290.9 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | CSX02_03175 | Not Available | Positive | 666867 - 668363 | 54265.9 |
| zn-dependent hydrolase | CSX02_03180 | Not Available | Positive | 668399 - 669661 | 46819.7 |
| cytidylate kinase | CSX02_03185 | Not Available | Positive | 669679 - 670305 | 23611.5 |
| hypothetical protein | CSX02_03190 | Not Available | Positive | 670522 - 671655 | 42819.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

