Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_03035 | Not Available | Negative | 637623 - 638097 | 18682.4 |
| hypothetical protein | CSX02_03040 | Not Available | Positive | 638371 - 639528 | 44785.9 |
| cell filamentation protein fic | CSX02_03045 | Not Available | Positive | 639911 - 640831 | 35201.9 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | CSX02_03050 | Not Available | Positive | 640926 - 641231 | 11113.4 |
| prevent-host-death protein | CSX02_03060 | Not Available | Positive | 641676 - 641915 | 8861.51 |
| resolvase | CSX02_03070 | Not Available | Positive | 642464 - 642772 | 12296.9 |
| abortive phage resistance protein | CSX02_03075 | Not Available | Positive | 642840 - 643850 | 39488.0 |
| carboxylesterase | CSX02_03080 | Not Available | Positive | 644190 - 645770 | 59323.5 |
| hypothetical protein | CSX02_03085 | Not Available | Negative | 645772 - 647040 | 48064.6 |
| hypothetical protein | CSX02_03090 | Not Available | Negative | 647055 - 648713 | 64418.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

