Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | CSX02_02975 | Not Available | Positive | 626535 - 627302 | 28043.8 |
| chromosome partitioning protein parb | CSX02_02980 | Not Available | Positive | 627306 - 628211 | 34038.3 |
| hypothetical protein | CSX02_02985 | Not Available | Positive | 628276 - 628773 | 18668.9 |
| hd domain-containing protein | CSX02_02990 | Not Available | Positive | 628824 - 629861 | 39277.0 |
| duf3881 domain-containing protein | CSX02_02995 | Not Available | Positive | 629864 - 630736 | 33300.0 |
| Trna-arg | Not Available | Not Available | Positive | 630743 - 630816 | Not Available |
| duf1287 domain-containing protein | CSX02_03005 | Not Available | Positive | 630928 - 631599 | 25853.5 |
| peptidase t | CSX02_03015 | Not Available | Negative | 633181 - 634404 | 44455.4 |
| Trna-lys | Not Available | Not Available | Positive | 634512 - 634587 | Not Available |
| hypothetical protein | CSX02_03030 | Not Available | Negative | 636860 - 637363 | 19210.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

