Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase | CSX02_02875 | Not Available | Negative | 606039 - 606596 | 20145.4 |
| kinase to dihydroxyacetone kinase | CSX02_02880 | Not Available | Negative | 606596 - 606853 | 10059.6 |
| fumarate hydratase | CSX02_02885 | Not Available | Negative | 606865 - 607710 | 30496.0 |
| dna gyrase subunit a | CSX02_02890 | Not Available | Negative | 607721 - 610201 | 92857.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | CSX02_02895 | Not Available | Negative | 610230 - 612164 | 71586.5 |
| dna replication and repair protein recf | CSX02_02900 | Not Available | Negative | 612106 - 613239 | 43650.5 |
| rna-binding protein | CSX02_02905 | Not Available | Negative | 613239 - 613454 | 7849.59 |
| dna polymerase iii subunit beta | CSX02_02910 | Not Available | Negative | 613454 - 614563 | 41669.6 |
| chromosomal replication initiator protein dnaa | CSX02_02915 | Not Available | Negative | 614839 - 616203 | 51976.2 |
| 50s ribosomal protein l34 | CSX02_02920 | Not Available | Positive | 616509 - 616643 | 5125.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

