Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | CSX02_02825 | Not Available | Positive | 594652 - 595668 | 36316.2 |
| phosphoglycerate kinase | CSX02_02830 | Not Available | Positive | 595811 - 597034 | 42831.5 |
| triose-phosphate isomerase | CSX02_02835 | Not Available | Positive | 597055 - 597801 | 26693.2 |
| hypothetical protein | CSX02_02840 | Not Available | Positive | 597805 - 599388 | 58562.1 |
| phosphoglycerate mutase (2,3-diphosphoglycerate-independent) | CSX02_02845 | Not Available | Positive | 599499 - 601040 | 56267.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CSX02_02850 | Not Available | Positive | 601083 - 601952 | 33133.2 |
| amidophosphoribosyltransferase | CSX02_02855 | Not Available | Positive | 601962 - 603446 | 54394.6 |
| adenylosuccinate lyase | CSX02_02860 | Not Available | Positive | 603482 - 604933 | 54470.6 |
| hypothetical protein | CSX02_02865 | Not Available | Positive | 605090 - 605518 | 16514.7 |
| Trna-ser | Not Available | Not Available | Positive | 605846 - 605933 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

