Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin, relb/dinj family | CSX02_00060 | Not Available | Negative | 11419 - 11712 | 10971.1 |
| hypothetical protein | CSX02_00065 | Not Available | Negative | 11871 - 12563 | 26713.2 |
| hypothetical protein | CSX02_00070 | Not Available | Negative | 12781 - 13776 | 39047.8 |
| hypothetical protein | CSX02_00075 | Not Available | Negative | 13776 - 14378 | 22734.9 |
| hypothetical protein | CSX02_00080 | Not Available | Negative | 14637 - 15503 | 33221.2 |
| dna invertase | CSX02_00090 | Not Available | Negative | 15884 - 17710 | 70148.9 |
| hypothetical protein | CSX02_00095 | Not Available | Negative | 17796 - 17987 | 7300.85 |
| hypothetical protein | CSX02_00100 | Not Available | Negative | 17987 - 18565 | 22334.8 |
| transcriptional regulator | CSX02_00105 | Not Available | Negative | 18580 - 19227 | 25303.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 19818 - 20168 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

