Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthetase b | CSX02_02775 | Not Available | Positive | 584354 - 586192 | 70447.8 |
| hypothetical protein | CSX02_02780 | Not Available | Positive | 586237 - 587631 | 51930.3 |
| aspartate racemase | CSX02_02785 | Not Available | Positive | 587662 - 588378 | 26453.3 |
| amp-dependent synthetase | CSX02_02790 | Not Available | Positive | 588383 - 589891 | 56896.3 |
| hypothetical protein | CSX02_02795 | Not Available | Positive | 589918 - 590442 | 18738.9 |
| hypothetical protein | CSX02_02800 | Not Available | Positive | 590662 - 591507 | 31230.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | CSX02_02805 | Not Available | Positive | 591528 - 592367 | 30464.0 |
| pantoate--beta-alanine ligase | CSX02_02810 | Not Available | Positive | 592364 - 593206 | 31229.8 |
| aspartate 1-decarboxylase | CSX02_02815 | Not Available | Positive | 593217 - 593606 | 14457.2 |
| histidinol phosphate phosphatase | CSX02_02820 | Not Available | Negative | 593614 - 594417 | 30679.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

