Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | CSX02_02725 | Not Available | Positive | 567522 - 570569 | 112928.0 |
| ion transporter | CSX02_02730 | Not Available | Negative | 570594 - 571556 | 36646.9 |
| hypothetical protein | CSX02_02735 | Not Available | Positive | 571730 - 574501 | 103405.0 |
| alpha-n-arabinofuranosidase | CSX02_02740 | Not Available | Positive | 574541 - 575950 | 51882.5 |
| cardiolipin synthase | CSX02_02745 | Not Available | Positive | 576060 - 577670 | 62022.2 |
| beta-glucosidase | CSX02_02750 | Not Available | Positive | 577706 - 580501 | 102850.0 |
| hypothetical protein | CSX02_02755 | Not Available | Positive | 580593 - 581273 | 26479.6 |
| acyl carrier protein | CSX02_02760 | Not Available | Positive | 581438 - 581668 | 8653.05 |
| membrane-bound o-acyltransferase family protein | CSX02_02765 | Not Available | Positive | 581672 - 583240 | 60076.2 |
| hypothetical protein | CSX02_02770 | Not Available | Positive | 583271 - 584353 | 42824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

