Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease atpase subunit | CSX02_02670 | Not Available | Positive | 553023 - 553214 | 7198.4 |
| 3-hydroxyacyl-coa dehydrogenase | CSX02_02675 | Not Available | Positive | 553241 - 554170 | 34652.7 |
| transcriptional regulator | CSX02_02680 | Not Available | Positive | 554231 - 554686 | 17681.4 |
| fad-binding dehydrogenase | CSX02_02685 | Not Available | Positive | 554762 - 556207 | 52175.2 |
| ferredoxin | CSX02_02690 | Not Available | Positive | 556264 - 558381 | 76598.3 |
| hypothetical protein | CSX02_02695 | Not Available | Positive | 558381 - 559490 | 40416.7 |
| hypothetical protein | CSX02_02700 | Not Available | Positive | 559633 - 561696 | 77502.8 |
| hypothetical protein | CSX02_02710 | Not Available | Positive | 563409 - 563921 | 20074.8 |
| multidrug abc transporter atp-binding protein | CSX02_02715 | Not Available | Positive | 563923 - 565713 | 65790.1 |
| abc transporter | CSX02_02720 | Not Available | Positive | 565728 - 567503 | 65527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

