Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | CSX02_02520 | Not Available | Positive | 522860 - 523480 | 22679.4 |
| had family hydrolase | CSX02_02525 | Not Available | Positive | 523572 - 524210 | 24404.9 |
| hypothetical protein | CSX02_02530 | Not Available | Positive | 524229 - 524783 | 21787.8 |
| hypothetical protein | CSX02_02535 | Not Available | Negative | 524894 - 525169 | 10687.4 |
| nucleotidyltransferase | CSX02_02540 | Not Available | Positive | 525310 - 525783 | 18330.1 |
| butyryl-coa:acetate coa-transferase | CSX02_02545 | Not Available | Positive | 525980 - 527326 | 49198.5 |
| hypothetical protein | CSX02_02550 | Not Available | Positive | 527450 - 528373 | 33712.8 |
| acetoacetate--coa ligase | CSX02_02555 | Not Available | Positive | 528455 - 530413 | 73060.3 |
| nitroreductase | CSX02_02560 | Not Available | Positive | 530540 - 531067 | 19507.2 |
| adenylate cyclase | CSX02_02565 | Not Available | Positive | 531148 - 531639 | 18743.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

