Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 8-oxo-dgtp diphosphatase mutt | CSX02_02420 | Not Available | Negative | 501662 - 502063 | 15195.1 |
| hypothetical protein | CSX02_02425 | Not Available | Negative | 502309 - 503151 | 32306.0 |
| aldo/keto reductase | CSX02_02430 | Not Available | Positive | 503370 - 504551 | 44339.3 |
| hypothetical protein | CSX02_02435 | Not Available | Negative | 504620 - 508480 | 138711.0 |
| arac family transcriptional regulator | CSX02_02440 | Not Available | Negative | 508649 - 509524 | 33937.9 |
| atp synthase f0 subunit c | CSX02_02445 | Not Available | Positive | 509983 - 510207 | 7318.32 |
| hypothetical protein | CSX02_02450 | Not Available | Positive | 510230 - 510712 | 18016.4 |
| f0f1 atp synthase subunit alpha | CSX02_02455 | Not Available | Positive | 510714 - 512726 | 73423.5 |
| atp synthase f1 subunit gamma | CSX02_02460 | Not Available | Positive | 512730 - 513731 | 38433.9 |
| f0f1 atp synthase subunit beta | CSX02_02465 | Not Available | Positive | 513737 - 515137 | 50998.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

