Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | CSX02_02320 | Not Available | Positive | 481556 - 482707 | 42311.7 |
| methylglyoxal synthase | CSX02_02325 | Not Available | Positive | 482704 - 483099 | 14770.0 |
| peptidase s11 | CSX02_02330 | Not Available | Positive | 483083 - 484066 | 35321.0 |
| twitching motility protein pilt | CSX02_02335 | Not Available | Positive | 484165 - 484587 | 15595.7 |
| hypothetical protein | CSX02_02340 | Not Available | Positive | 484642 - 486042 | 53114.4 |
| yggs family pyridoxal phosphate-dependent enzyme | CSX02_02345 | Not Available | Positive | 486062 - 486760 | 26366.0 |
| cell division protein sepf | CSX02_02350 | Not Available | Positive | 486779 - 487309 | 19785.4 |
| lipoprotein signal peptidase | CSX02_02355 | Not Available | Positive | 487418 - 488008 | 22827.5 |
| rna pseudouridine synthase | CSX02_02360 | Not Available | Positive | 488005 - 488934 | 35060.1 |
| cytidylate kinase | CSX02_02365 | Not Available | Positive | 488999 - 489628 | 23842.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

