Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | CSX02_02270 | Not Available | Positive | 467016 - 468611 | 58243.1 |
| dna mismatch repair protein muts | CSX02_02275 | Not Available | Positive | 468672 - 471296 | 99287.5 |
| dna mismatch repair protein mutl | CSX02_02280 | Not Available | Positive | 471319 - 473286 | 75377.6 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | CSX02_02285 | Not Available | Positive | 473286 - 474236 | 36551.8 |
| hypothetical protein | CSX02_02290 | Not Available | Positive | 474229 - 475521 | 47264.7 |
| hypothetical protein | CSX02_02295 | Not Available | Positive | 475580 - 476257 | 25180.6 |
| rod shape-determining protein | CSX02_02300 | Not Available | Positive | 476270 - 477286 | 37308.1 |
| rod shape-determining protein mrec | CSX02_02305 | Not Available | Positive | 477295 - 478164 | 31853.9 |
| rod shape-determining protein mred | CSX02_02310 | Not Available | Positive | 478164 - 478691 | 20302.8 |
| peptidoglycan glycosyltransferase | CSX02_02315 | Not Available | Positive | 478681 - 481536 | 107038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

