Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase glga | CSX02_02220 | Not Available | Positive | 453921 - 455375 | 56146.9 |
| dna translocase ftsk | CSX02_02225 | Not Available | Positive | 455525 - 457981 | 90064.7 |
| formate--tetrahydrofolate ligase | CSX02_02230 | Not Available | Positive | 458031 - 459701 | 59816.3 |
| cell surface protein | CSX02_02235 | Not Available | Positive | 459726 - 460886 | 43326.1 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CSX02_02240 | Not Available | Positive | 460935 - 461411 | 18445.5 |
| phoh family protein | CSX02_02245 | Not Available | Positive | 461439 - 462431 | 36543.5 |
| hypothetical protein | CSX02_02250 | Not Available | Positive | 462428 - 463642 | 46138.9 |
| rrna maturation rnase ybey | CSX02_02255 | Not Available | Positive | 463608 - 464105 | 19414.8 |
| stage v sporulation protein b | CSX02_02260 | Not Available | Positive | 464149 - 465816 | 60240.9 |
| aminoacetone oxidase family fad-binding enzyme | CSX02_02265 | Not Available | Positive | 465829 - 467019 | 43751.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

