Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | CSX02_02115 | Not Available | Positive | 431507 - 432766 | 45215.6 |
| 3-isopropylmalate dehydratase small subunit | CSX02_02120 | Not Available | Positive | 432805 - 433293 | 17689.8 |
| hypothetical protein | CSX02_02125 | Not Available | Negative | 433280 - 434080 | 30942.7 |
| threonine synthase | CSX02_02130 | Not Available | Positive | 434192 - 435688 | 55356.9 |
| chemotaxis protein chex | CSX02_02135 | Not Available | Negative | 435722 - 436609 | 33784.8 |
| two-component system response regulator | CSX02_02140 | Not Available | Negative | 436613 - 436990 | 13959.3 |
| hypothetical protein | CSX02_02145 | Not Available | Positive | 437123 - 437467 | 13082.6 |
| phenylalanine--trna ligase subunit alpha | CSX02_02155 | Not Available | Positive | 438098 - 439120 | 37920.7 |
| phenylalanine--trna ligase subunit beta | CSX02_02160 | Not Available | Positive | 439144 - 441564 | 89172.0 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | CSX02_02165 | Not Available | Positive | 441579 - 442616 | 38938.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

