Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen operon protein glgx | CSX02_02065 | Not Available | Positive | 418094 - 419965 | 72084.7 |
| catalase | CSX02_02070 | Not Available | Positive | 419967 - 420587 | 24593.9 |
| magnesium chelatase | CSX02_02075 | Not Available | Positive | 420710 - 422233 | 56763.0 |
| dna-protecting protein dpra | CSX02_02080 | Not Available | Positive | 422233 - 423318 | 40692.2 |
| dna topoisomerase i | CSX02_02085 | Not Available | Positive | 423346 - 425415 | 77302.4 |
| acetolactate synthase small subunit | CSX02_02090 | Not Available | Positive | 425534 - 426031 | 18405.1 |
| ketol-acid reductoisomerase | CSX02_02095 | Not Available | Positive | 426077 - 427102 | 37365.7 |
| leucine--trna ligase | CSX02_02100 | Not Available | Positive | 427224 - 429638 | 91611.0 |
| hypothetical protein | CSX02_02105 | Not Available | Negative | 429685 - 430353 | 26143.4 |
| lysr family transcriptional regulator | CSX02_02110 | Not Available | Negative | 430449 - 431351 | 33887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

