Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-binding oxidoreductase | CSX02_02015 | Not Available | Positive | 402794 - 403684 | 32798.7 |
| glutamate synthase (nadph), homotetrameric | CSX02_02020 | Not Available | Positive | 403684 - 405075 | 49153.2 |
| atpase p | CSX02_02025 | Not Available | Positive | 405100 - 407529 | 88715.6 |
| hypothetical protein | CSX02_02030 | Not Available | Positive | 407596 - 411132 | 139144.0 |
| hypothetical protein | CSX02_02035 | Not Available | Positive | 411145 - 412365 | 47402.2 |
| hypothetical protein | CSX02_02040 | Not Available | Positive | 412375 - 413214 | 32905.1 |
| hypothetical protein | CSX02_02045 | Not Available | Positive | 413217 - 414374 | 45708.2 |
| glutamate--trna ligase | CSX02_02050 | Not Available | Positive | 414395 - 415849 | 55380.0 |
| atp-dependent helicase | CSX02_02055 | Not Available | Positive | 415871 - 417697 | 71847.0 |
| duf1292 domain-containing protein | CSX02_02060 | Not Available | Negative | 417684 - 418007 | 12041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

