Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | CSX02_01965 | Not Available | Negative | 390313 - 391068 | 29570.3 |
| diacylglycerol kinase | CSX02_01970 | Not Available | Negative | 391083 - 392060 | 35846.6 |
| hypothetical protein | CSX02_01975 | Not Available | Positive | 392415 - 393242 | 32721.2 |
| abc transporter atp-binding protein | CSX02_01980 | Not Available | Positive | 393245 - 393940 | 26267.5 |
| hypothetical protein | CSX02_01985 | Not Available | Positive | 393941 - 395152 | 47628.6 |
| hypothetical protein | CSX02_01990 | Not Available | Positive | 395145 - 396215 | 42231.5 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | CSX02_01995 | Not Available | Positive | 396491 - 398305 | 66460.7 |
| 2-isopropylmalate synthase | CSX02_02000 | Not Available | Positive | 398502 - 400496 | 75462.5 |
| cobalamin biosynthesis protein cobw | CSX02_02005 | Not Available | Positive | 400637 - 401764 | 43070.0 |
| gtpase | CSX02_02010 | Not Available | Positive | 401821 - 402765 | 37041.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

