Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation subunit of dna-dependent dna polymerase | CSX02_01915 | Not Available | Positive | 379280 - 380383 | 43586.9 |
| chemotaxis protein cher | CSX02_01920 | Not Available | Negative | 380365 - 381141 | 30327.5 |
| 30s ribosomal protein s1 | CSX02_01925 | Not Available | Negative | 381220 - 382353 | 41273.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CSX02_01930 | Not Available | Negative | 382337 - 383191 | 31503.6 |
| (d)cmp kinase | CSX02_01935 | Not Available | Negative | 383181 - 383855 | 24755.4 |
| aminoacetone oxidase family fad-binding enzyme | CSX02_01940 | Not Available | Negative | 383870 - 385099 | 44823.0 |
| murr/rpir family transcriptional regulator | CSX02_01945 | Not Available | Negative | 385092 - 386021 | 34712.8 |
| serine acetyltransferase | CSX02_01950 | Not Available | Negative | 386038 - 386991 | 35937.9 |
| 30s ribosomal protein s21 | CSX02_01955 | Not Available | Negative | 387066 - 387242 | 6906.38 |
| alanine--trna ligase | CSX02_01960 | Not Available | Negative | 387369 - 390029 | 98013.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

