Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | CSX02_01810 | Not Available | Positive | 360049 - 360234 | 6888.39 |
| sporulation protein | CSX02_01815 | Not Available | Negative | 360295 - 360672 | 13390.9 |
| hypothetical protein | CSX02_01820 | Not Available | Negative | 360688 - 361494 | 31094.4 |
| hypothetical protein | CSX02_01825 | Not Available | Negative | 361481 - 361816 | 12851.4 |
| nudix hydrolase | CSX02_01830 | Not Available | Negative | 361818 - 362270 | 17766.1 |
| peptidoglycan glycosyltransferase | CSX02_01835 | Not Available | Negative | 362327 - 363763 | 53784.2 |
| cell division protein ftsw | CSX02_01840 | Not Available | Negative | 363738 - 365087 | 50585.7 |
| peptidase u32 | CSX02_01845 | Not Available | Negative | 365089 - 367221 | 81250.0 |
| cell division protein zapa | CSX02_01850 | Not Available | Negative | 367276 - 367701 | 16029.9 |
| holliday junction branch migration dna helicase ruvb | CSX02_01855 | Not Available | Negative | 367786 - 368784 | 37050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

