Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | CSX02_01760 | Not Available | Positive | 349698 - 350615 | 34605.8 |
| gtp pyrophosphokinase | CSX02_01765 | Not Available | Negative | 350672 - 351325 | 25476.8 |
| hypothetical protein | CSX02_01770 | Not Available | Negative | 351345 - 352058 | 26166.5 |
| lysozyme | CSX02_01775 | Not Available | Negative | 352163 - 353095 | 35622.7 |
| Trna-cys | Not Available | Not Available | Positive | 353440 - 353510 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 353548 - 353620 | Not Available |
| hypothetical protein | CSX02_01790 | Not Available | Positive | 354003 - 355751 | 66872.9 |
| atp-dependent dna helicase recg | CSX02_01795 | Not Available | Negative | 355746 - 357809 | 78262.8 |
| dihydroxyacetone kinase | CSX02_01800 | Not Available | Negative | 357832 - 359499 | 60544.3 |
| asp23/gls24 family envelope stress response protein | CSX02_01805 | Not Available | Negative | 359513 - 359869 | 12975.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

