Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | CSX02_01710 | Not Available | Negative | 337018 - 338439 | 52973.8 |
| hydratase | CSX02_01715 | Not Available | Negative | 338443 - 340722 | 82584.5 |
| hypothetical protein | CSX02_01720 | Not Available | Negative | 340784 - 342253 | 55587.2 |
| dna-binding response regulator | CSX02_01725 | Not Available | Negative | 342257 - 342943 | 25681.9 |
| hypothetical protein | CSX02_01730 | Not Available | Negative | 342940 - 343773 | 31878.5 |
| phosphoenolpyruvate--protein phosphotransferase | CSX02_01735 | Not Available | Negative | 343866 - 345482 | 59539.4 |
| hpr family phosphocarrier protein | CSX02_01740 | Not Available | Negative | 345486 - 345743 | 9137.12 |
| pts fructose transporter subunit iic | CSX02_01745 | Not Available | Negative | 345773 - 347815 | 70585.6 |
| 1-phosphofructokinase | CSX02_01750 | Not Available | Negative | 347828 - 348742 | 33268.5 |
| deor family transcriptional regulator | CSX02_01755 | Not Available | Negative | 348739 - 349485 | 28027.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

