Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flis | CSX02_01660 | Not Available | Negative | 321749 - 322222 | 18403.8 |
| flagellin | CSX02_01665 | Not Available | Negative | 322235 - 323680 | 52568.2 |
| disulfide oxidoreductase | CSX02_01670 | Not Available | Positive | 323821 - 324045 | 7986.73 |
| competence protein | CSX02_01675 | Not Available | Negative | 324086 - 324829 | 28388.8 |
| hypothetical protein | CSX02_01680 | Not Available | Positive | 324952 - 326319 | 51342.6 |
| hypothetical protein | CSX02_01685 | Not Available | Positive | 326481 - 326963 | 18329.6 |
| glycosyl hydrolase family 18 | CSX02_01690 | Not Available | Positive | 327318 - 329036 | 64624.3 |
| hypothetical protein | CSX02_01695 | Not Available | Negative | 329033 - 332053 | 112483.0 |
| 1,4-alpha-glucan branching enzyme | CSX02_01700 | Not Available | Negative | 332177 - 334090 | 74219.8 |
| hypothetical protein | CSX02_01705 | Not Available | Negative | 334116 - 336905 | 103034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

