Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_01560 | Not Available | Negative | 302333 - 302785 | 16967.6 |
| hypothetical protein | CSX02_01565 | Not Available | Negative | 302934 - 304430 | 57607.5 |
| hypothetical protein | CSX02_01570 | Not Available | Negative | 304444 - 305502 | 40445.1 |
| hnh endonuclease | CSX02_01575 | Not Available | Negative | 305530 - 306513 | 38153.8 |
| dna (cytosine-5-)-methyltransferase | CSX02_01580 | Not Available | Negative | 306500 - 308287 | 68855.3 |
| hypothetical protein | CSX02_01585 | Not Available | Negative | 308293 - 308724 | 17638.2 |
| hypothetical protein | CSX02_01590 | Not Available | Negative | 308734 - 309468 | 27202.3 |
| hypothetical protein | CSX02_01595 | Not Available | Positive | 310076 - 310309 | 9161.93 |
| recombinase | CSX02_01600 | Not Available | Positive | 310350 - 311462 | 42708.8 |
| hypothetical protein | CSX02_01605 | Not Available | Positive | 311606 - 313522 | 75461.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

