Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hit domain-containing protein | CSX02_01510 | Not Available | Negative | 293578 - 293991 | 15187.2 |
| scp-2 sterol transfer family protein | CSX02_01515 | Not Available | Negative | 294039 - 295028 | 37685.2 |
| hypothetical protein | CSX02_01520 | Not Available | Negative | 295127 - 296263 | 44217.4 |
| hypothetical protein | CSX02_01525 | Not Available | Negative | 296256 - 296489 | 9156.0 |
| prepilin peptidase | CSX02_01530 | Not Available | Negative | 296486 - 296929 | 15953.4 |
| hypothetical protein | CSX02_01535 | Not Available | Negative | 296942 - 297751 | 30301.0 |
| hypothetical protein | CSX02_01540 | Not Available | Negative | 297814 - 299295 | 54652.8 |
| hypothetical protein | CSX02_01545 | Not Available | Negative | 299295 - 299396 | 3489.53 |
| hypothetical protein | CSX02_01550 | Not Available | Positive | 300488 - 302083 | 60675.6 |
| hypothetical protein | CSX02_01555 | Not Available | Negative | 302141 - 302329 | 7056.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

