Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_01460 | Not Available | Negative | 282428 - 282622 | 7402.89 |
| lysine--trna ligase | CSX02_01465 | Not Available | Negative | 283040 - 284632 | 60472.8 |
| transcription elongation factor grea | CSX02_01470 | Not Available | Negative | 284703 - 285188 | 17948.3 |
| hypothetical protein | CSX02_01475 | Not Available | Negative | 285287 - 287377 | 78638.9 |
| trna dihydrouridine synthase dusb | CSX02_01480 | Not Available | Negative | 287469 - 288446 | 36812.7 |
| hypothetical protein | CSX02_01485 | Not Available | Negative | 288439 - 288774 | 13157.5 |
| biotin--[acetyl-coa-carboxylase] ligase | CSX02_01490 | Not Available | Negative | 288767 - 289768 | 36954.2 |
| ornithine carbamoyltransferase | CSX02_01495 | Not Available | Negative | 289881 - 290867 | 36615.0 |
| hypothetical protein | CSX02_01500 | Not Available | Negative | 291024 - 292223 | 43027.1 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CSX02_01505 | Not Available | Positive | 292429 - 293499 | 38788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

