Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_01410 | Not Available | Negative | 275997 - 276380 | 14559.7 |
| hypothetical protein | CSX02_01415 | Not Available | Negative | 276578 - 277477 | 33230.2 |
| hypothetical protein | CSX02_01420 | Not Available | Negative | 277707 - 278348 | 24193.2 |
| nudix hydrolase | CSX02_01425 | Not Available | Negative | 278451 - 278942 | 19003.7 |
| hypothetical protein | CSX02_01430 | Not Available | Negative | 278945 - 279598 | 25865.3 |
| hypothetical protein | CSX02_01435 | Not Available | Negative | 279713 - 279997 | 10618.8 |
| transcriptional regulator | CSX02_01440 | Not Available | Negative | 279999 - 280274 | 11085.5 |
| chromosome partitioning protein parb | CSX02_01445 | Not Available | Negative | 280447 - 281346 | 34647.8 |
| chromosome partitioning protein para | CSX02_01450 | Not Available | Negative | 281369 - 282157 | 28706.0 |
| hypothetical protein | CSX02_01455 | Not Available | Negative | 282172 - 282384 | 8243.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

