Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-tail adaptor protein | CSX02_08965 | Not Available | Positive | 1864591 - 1864932 | 12843.3 |
| Hypothetical protein | CSX02_08970 | Not Available | Positive | 1864929 - 1865312 | 14152.0 |
| Putative aminopeptidase | CSX02_08975 | Not Available | Positive | 1865481 - 1865798 | 12280.2 |
| Major tail protein | CSX02_08980 | Not Available | Positive | 1865817 - 1866677 | 30295.1 |
| Hypothetical protein | CSX02_08985 | Not Available | Positive | 1866732 - 1867112 | 14535.0 |
| Putative tail tape measure protein | CSX02_08990 | Not Available | Positive | 1867292 - 1870117 | 98963.9 |
| hypothetical protein | CSX02_08995 | Not Available | Positive | 1870119 - 1870481 | 13538.1 |
| merr family transcriptional regulator | CSX02_09000 | Not Available | Positive | 1870602 - 1871465 | 33126.6 |
| Tail protein | CSX02_09005 | Not Available | Positive | 1871540 - 1873423 | 69144.3 |
| hypothetical protein | CSX02_09010 | Not Available | Positive | 1873434 - 1874834 | 51331.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

