Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CSX02_01260 | Not Available | Negative | 240218 - 240991 | 29922.2 |
| elongation factor 4 | CSX02_01265 | Not Available | Negative | 240998 - 242812 | 67722.7 |
| phosphopentomutase | CSX02_01270 | Not Available | Negative | 242831 - 244021 | 44076.3 |
| deoxyribose-phosphate aldolase | CSX02_01275 | Not Available | Negative | 244044 - 244697 | 23265.1 |
| cytidine deaminase | CSX02_01280 | Not Available | Negative | 244718 - 245149 | 15573.6 |
| uridine phosphorylase | CSX02_01285 | Not Available | Negative | 245146 - 245931 | 28233.7 |
| dna polymerase iii subunit delta | CSX02_01290 | Not Available | Positive | 246019 - 246990 | 37074.6 |
| 30s ribosomal protein s20 | CSX02_01295 | Not Available | Negative | 247059 - 247337 | 9857.1 |
| hypothetical protein | CSX02_01300 | Not Available | Negative | 247449 - 249695 | 83454.9 |
| sporulation and spore germination | CSX02_01305 | Not Available | Negative | 249692 - 250681 | 36985.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

